@ME, thanks for your reply..
Are the wirings, coil, and distributor related to the spark plugs? Any idea why replacing the spark plugs would calm the problem down if it was a problem with those three things? And how exactly do you check if it's a problem with wiring, coil, or distributor?
Honda says that they have already checked out the spark plugs, wiring, ignition coil, throttle body, fuel pump thoroughly.. but like you said, I don't really trust them to have done a thorough job