Thanks for the advice KingpiN.
I drove my car to Honda Fort, Queens Road Lahore to get it checked up. However what i had in my mind was obviously true. As the issue wasn't persistent, the tech ppl there were not supposed to see the problem first hand.
The foreman was assigned the task to check my issue. To my surprise he first opened the lid of stick shift and its leather cover, used a WD-40 to spray on its ends. Then i narrated him my issue in detail again and then he drove the car out to experience any issue first hand.
The problem didn't come up as i expected. However when we returned to the workshop he called his staff and asked one of those to adjust the clutch a bit with his tools, while he remained seated inside.
Finally he asked me to check for the issue now that they adjusted the clutch as he expected the problem to subside. On my drive back to office, the change i noticed was that the clutch was more softer now. I don't know how it helps me with the issue i had or God Forbid, might still have!