I would not recommend replacement, as the ff cng kit installed in liana is the state-of-the-art technology and highly fuel efficient. And if u still think u want to replace, then sell the cng kit to me 
Secondly, for information of all, there are TWO independent (but inter-linked) ECU units in FF Liana- one for Petrol and the other for CNG/LPG. So please dont fight.
Thirdly, @Mirza, I have been through all these hickups, but every time its the smallest possible reason for the problem. The biggest lapse on your part is that u left the car on tech's disposal.....my advice to all......pl always remain present while ur car is being repaired and if possible also get along with the tech as to what he is doing. Now i think the tech might have disconnected CNG from either of the three possible connections:
1. There is a fuse in-between the wire connecting batt terminal to the solenoid (that Black round unit right on the top of the reducer).
2. On the same wire there is a connector that might have been disconnected.
3. Connector of CNG ECU located at inner-top side of the glove box, might have been disconnected.
4. Open the hood and check for any disconnected wire or connector related to CNG components i.e Solenoid or injectors rail etc.
By first connecting CNG, u might be good to go because most of the time once the ECU is reset (by De-energizing the ECU by any means) the problem is usually solved.
Are u sure they connected a separate ECU to check the problem? and if its so then is ur original ECU still with u?
Also try cleaning up EGR, in some cases, the EGR (Exhaust Gas Regulator) gets partially blocked due to carbon and cause jerks on acceleration and constant speed.
Also sometimes, either one or both Coils gets weak and cause similar jerking problems. If coils are weak the mild problem of pickup is also experienced on petrol......Even the China-made Coils are good to use (Price around 5000/- for the pair)
May that be helpful....as i am a DIYer and Alhumdullilah addressed such problem twice happening on my liana at different point of times.
Best of luck
Ihsaan