If such happens in future, u can close the window by not activating the auto option, and its going to go up as it should, just that ul have to hold the button unless the window closes completly.
And yes Hondas have this issue almost ever since or atleast on most of the cars 2002+
had in our Civic 02, 04, 06, 07, 08
Have it in Our City 07, 08 too.
btw some one told me, the 7cf interior polish sprays are better tobe used rather then using WD40, or else machine ka teil