if the fuel is dirty the filters will choke up quick - the ill running of the modern common rail engine rail is mostly due to buying a gray import used vehicle - which has not got a service history or check - and us not paying attention to upkeep.
In this light I would like to share - that I had been delivered a 1KD- Hilux vigo which would start but would not rev - It had a file with it showing proposals for injector change, CR pump failure etc. with an amount that could shock you.
When it left my shop the only replaced part was the MAF. The injectors were within spec but were given a cleaning test sequence. I have another experience of an MB CDI - the biggest names in karachi were saying the engine is dead, the ecu is dead or the injectors are worn. Nonsense - the only problem was some broken wires in the loom.
Both these cars were not used gray imports - but bought brand new - and have clocked more than 100,000 kms without a hiccup except filter changes.
On the other hand - yes I had to change sets of nozzles in nissan and toyota commonrail engines that were imported fit in used gray import auction cars, these certain vehicles were using their original factory fuel filters for 40,000 kms, which in my opinion is terrible upkeep.
The last bit for failure in the toyota mill is the stupid intercooler that lives on the valve cover cooking the injectors for no good reason. Why couldnt they put it infront of the car like any sensible engineer would.
should we blame fuel??
on a last note I want to reply you on your comment that older engines ports are not designed to fit a turbo. WHY not - as long as it is a manifold design (show me an engine with no manifold) it will fit by making a manifold - bolting the turbo, fabbing the exhaust and plumbing the oil feed/return lines. We are not even going to the bit of fuelling..